PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020683711.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 165aa MW: 18544.9 Da PI: 9.1324 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.9 | 3.7e-16 | 14 | 62 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r +k +g+Wv+eIr+p gk++r++lg+f ++e+Aa a++ a++ l+g XP_020683711.1 14 YRGIRKRK-WGKWVSEIREP---GKKTRIWLGSFESPEMAATAHDVAALWLRG 62 9****999.**********8...557**********************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MSREQEEGGA AATYRGIRKR KWGKWVSEIR EPGKKTRIWL GSFESPEMAA TAHDVAALWL 60 RGRDARLNFP DTVHDLPRPA SSRPSDIRSA AAEAAKRIRF RPEPLRPDRF STGLWTGNWG 120 LDSPGMWREL EEALFPPPPP AAAAAAFEEI DGRLWEWGPL LSSLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 2e-38 | ERF family protein |