PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020683578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 377aa MW: 41966.8 Da PI: 7.0896 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.8 | 1.6e-51 | 11 | 140 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_020683578.1 11 VPPGFRFHPTEEELLSYYLRKKVACEKIDL-DVIRDVDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 104 69****************************.9***************964443122456************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ + + +g++ktLvfykgrap+g+k+dW+mheyrle XP_020683578.1 105 YA-SFKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLE 140 **.8889****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MSISVNGQSC VPPGFRFHPT EEELLSYYLR KKVACEKIDL DVIRDVDLNK LEPWDIQEKC 60 RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYASFKR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLE EHSDNSNSLS NISSAIGDSL TQEEGWVVCR VFKKKSLNKI 180 LDSSNNNYSS SFTTDPKSPL LHTNSESALD QIFQYMGRSC KQEREVMSTI NTSKISSRYL 240 RPIDTILGAT ANLHEHFLKL PALESPTTVT PISAGDYPSL LGTDHSCNSY HAEVVNMQPS 300 PFHHDPGLSD WAALDRLVAS HLNGDDANAF SFYPSATGRL LGSCSGGGEG EGDLWSFTQS 360 AASSASDHVS HVSHASI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 1e-105 | NAC family protein |