PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020683578.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 377aa    MW: 41966.8 Da    PI: 7.0896
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020683578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.81.6e-51111401129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k++     +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk +
  XP_020683578.1  11 VPPGFRFHPTEEELLSYYLRKKVACEKIDL-DVIRDVDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 104
                     69****************************.9***************964443122456************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     ++ + + +g++ktLvfykgrap+g+k+dW+mheyrle
  XP_020683578.1 105 YA-SFKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLE 140
                     **.8889****************************85 PP

Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MSISVNGQSC VPPGFRFHPT EEELLSYYLR KKVACEKIDL DVIRDVDLNK LEPWDIQEKC  60
RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYASFKR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLE EHSDNSNSLS NISSAIGDSL TQEEGWVVCR VFKKKSLNKI  180
LDSSNNNYSS SFTTDPKSPL LHTNSESALD QIFQYMGRSC KQEREVMSTI NTSKISSRYL  240
RPIDTILGAT ANLHEHFLKL PALESPTTVT PISAGDYPSL LGTDHSCNSY HAEVVNMQPS  300
PFHHDPGLSD WAALDRLVAS HLNGDDANAF SFYPSATGRL LGSCSGGGEG EGDLWSFTQS  360
AASSASDHVS HVSHASI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.11e-105NAC family protein