PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020683568.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 179aa MW: 19288.5 Da PI: 4.2454 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.8 | 2.4e-17 | 25 | 75 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s y+G+r++ +g+Wv+eIr+p++ + r++lg++ t+e+Aa a++ a+++l+g+ XP_020683568.1 25 SPYRGIRRR--SGKWVSEIREPRK---SNRIWLGTYPTPEMAATAYDVAALALRGA 75 68****854..6*********954...49************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MADSTPPSHV QAPENPDPNP TGRPSPYRGI RRRSGKWVSE IREPRKSNRI WLGTYPTPEM 60 AATAYDVAAL ALRGADAVLN FPDAARSRSA PLSVSPADIQ AAAAAAAAEL EARSGAVEAS 120 EARVEELGDF VDEDELFDMP QLLMNMAEGM LMSPPRLSPP QSDESAGVLE GENLWKFDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-41 | ERF family protein |