PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020683531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 178aa MW: 19751.3 Da PI: 4.0748 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.9 | 2.2e-12 | 28 | 71 | 5 | 53 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 G++ ++rg+W + I+ ++e +k+++lg++ t+e+Aa a++ a++++ XP_020683531.1 28 GIS--SRRGKWTSKIYSWRE---SKTIWLGTYSTPEMAAIAYDVAALAF 71 664..679*********965...5**********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MANSNPLSKV EIPASNTPPI IPPSYYLGIS SRRGKWTSKI YSWRESKTIW LGTYSTPEMA 60 AIAYDVAALA FNEGNAVFNF PYAIRSHPMP KSTSIADIQA AAAAAAEQFG ARFDDVDASE 120 VPLKEICEYV DEEELFNMPQ VLIEMAEGLM VSPPRLGLLE SDEPLEILKD DNLWNFDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 6e-26 | ERF family protein |