PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020683530.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 164aa    MW: 18035.3 Da    PI: 4.3466
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020683530.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.21.1e-092473155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpse..ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+y+GV  +   g+W+++  d+    +  +k+++lg++ t+e+A  a++ a ++++g
  XP_020683530.2 24 SHYRGVVLR--GGKWASR--DY-RfhD--SKSIWLGTYSTPEMASIAHDVAELAING 73
                    78****865..6****88..54.3233..4********************9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MADSTPSSQV QIPASNAQTS IPPSHYRGVV LRGGKWASRD YRFHDSKSIW LGTYSTPEMA  60
SIAHDVAELA INGDRAWLNF LDVIQSLPVP KSTSIVDIRA AATAAAASAE QFIVKHEVVD  120
VYEVPSQEIT EYVDEDELFN MPQLLIEMAE GLMVSPPRFG PPYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.17e-24ERF family protein