PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020683527.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 24589.9 Da PI: 8.76 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.4 | 1.7e-08 | 26 | 73 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 y GVr + + +W +e ++ k++++g++ t+e+Aa a++ a+++++g XP_020683527.1 26 YYGVRLRGR--KWTSE---AYNqH--EsKNIWIGTHFTPEMAAIAHDVAALAFNG 73 669998775..9**99...44322..25**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MANSNPPSQV QISASNTQPS VPPFHYYGVR LRGRKWTSEA YNQHESKNIW IGTHFTPEMA 60 AIAHDVAALA FNGASALLNF PDIIQSLPVP KSISIVDIRA AVEEATKQFS AMPEVVDASE 120 VPPQDIGKTY ITACPRDKSC QRPLPRLPVP VLHAQGCPRA PTLAASTCLH THALAHSSLI 180 ASAMSGRVNP ATCWVGSGFG FSTHLSTRVG LGSARFNPGQ MRIRSESDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25810.1 | 3e-19 | ERF family protein |