PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020683382.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | TALE | ||||||||
Protein Properties | Length: 378aa MW: 42084 Da PI: 5.5659 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23 | 1.4e-07 | 327 | 360 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + XP_020683382.1 327 KWPYPTEDDKARLVQETGLQLKQINNWFINQRKR 360 569*****************************87 PP | |||||||
2 | ELK | 29.1 | 2.2e-10 | 281 | 302 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_020683382.1 281 ELKHELKNGYKEKIVDIREEIL 302 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MAYHNHLTQE ITLPAYADQH LVEDAGKSPT VAAAATARHL AGGPSWLNNP ILRQPHQFVD 60 GSFLHLQTAP APFRSADDEV PASSDSIIVA TAGDEETPAG SGEAVEGTWQ RARYKAEILA 120 HPLYEQLLSA HVACLRIATP VDQLPRIDAQ LAQSQQVVAK YSVMAGGQML AGEEKELDQF 180 MTHYVLLLCS FKEQLQQHVR VHAMEAVMAC WELEQSLQSL TGVSPGEGTG ATMSDDDDDD 240 DQADGETNFY DGSFDGSDSM GFGPLVPTES ERSLMERVRQ ELKHELKNGY KEKIVDIREE 300 ILRKRRAGKL PGDTTSTLKA WWQSHAKWPY PTEDDKARLV QETGLQLKQI NNWFINQRKR 360 NWHSNPSSST ALKSKRKR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 358 | 378 | RKRNWHSNPSSSTALKSKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.2 | 1e-164 | TALE family protein |