PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020683196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 219aa MW: 25000.5 Da PI: 9.5206 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 128.5 | 5e-40 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 lppGfrFhPt+eelvv+yL++k+ + +l++ +i+e+d+ k++PwdLp + ++ ++++f+ +++k+++++ r + +++ gyWk+ gk+k+vl+ XP_020683196.1 14 LPPGFRFHPTEEELVVQYLRRKAFSFPLPA-AIIPEIDLGKLNPWDLP--CGSGGEKYFFYLRESKSEQKKGRVSYqKARLGYWKSMGKEKPVLA 105 79***************************9.88***************..445666777777777777776676665899**************9 PP NAM 95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++elvglk+++vfy+g++p+g+ktdW+m++y+l XP_020683196.1 106 SshGNELVGLKQVMVFYRGKSPHGSKTDWIMNQYSL 141 8778889***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MERKEFMQHG LVRLPPGFRF HPTEEELVVQ YLRRKAFSFP LPAAIIPEID LGKLNPWDLP 60 CGSGGEKYFF YLRESKSEQK KGRVSYQKAR LGYWKSMGKE KPVLASSHGN ELVGLKQVMV 120 FYRGKSPHGS KTDWIMNQYS LSNNELLKSS TQSLIASSKE WVVCQIFVKR RSMKLRVRNS 180 RHEENLQIPA TSSSSSSSSC ITEDLSDEEE SVNGEEAMS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 3e-58 | NAC family protein |