PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020682849.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family B3
Protein Properties Length: 383aa    MW: 43888.9 Da    PI: 9.3611
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020682849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.31.8e-1518108199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+     +l+s  +++p  f ++ +g    +    l+ +s   W v l   kk+++ ++++GW+ F+ ++ L +gDf++F+++g+s+f   v+
  XP_020682849.1  18 FFKIY--LPNLSSTHMRIPPAFHRHVEGR--APARFYLKGPSEFIWGVDL--VKKPDGLFFSDGWETFALDHALAAGDFLLFEYNGNSTF--SVM 104
                     67777..566777779*******888777..4557***************..**********************************9999..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f++
  XP_020682849.1 105 IFDN 108
                     9986 PP

2B348.51.5e-15259349198
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f  v++ s+v +   l+lp +f  +h  +++     +l l d++ ++W v++i++k++    l++GW +F+  n+L++ D+++F+l++  +++++
  XP_020682849.1 259 FMMVMKGSYVYNGFYLTLPGPFPFKHlpDYN----GELFLHDPNKQQWAVRYIFSKRP---ALSGGWGKFAVGNNLETDDVCIFELIK--KKHMK 344
                     56678899**************989955433....37***************998888...7***********************997..56679 PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v++fr
  XP_020682849.1 345 VHIFR 349
                     99998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MPKSNSPPES TPRRSYHFFK IYLPNLSSTH MRIPPAFHRH VEGRAPARFY LKGPSEFIWG  60
VDLVKKPDGL FFSDGWETFA LDHALAAGDF LLFEYNGNST FSVMIFDNTA CEKEVAFFAR  120
PTCDEKVSFS FDERVKEEKK DNSYVGTNQP VKKRTRTLPG TNNECSEVFM ARMWSMQRQA  180
AQALISGRLD HSRDSSNLFN NAIECPSDAN LVLSDNRAND ASRKKRYRGF VSQRRPVTQK  240
ERDDALAKAQ SFKSENPCFM MVMKGSYVYN GFYLTLPGPF PFKHLPDYNG ELFLHDPNKQ  300
QWAVRYIFSK RPALSGGWGK FAVGNNLETD DVCIFELIKK KHMKVHIFRV LEDIKPLLRP  360
GQVKDLVAND EANGNFKALI DYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-32B3 family protein