PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020682668.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 309aa    MW: 33368 Da    PI: 10.3065
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020682668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.15.6e-31237295259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D+y+WrKYGqK++kgs++pr+YY+C+   gCp++k+ver+++dp+++++tYegeH h+
  XP_020682668.1 237 ADEYSWRKYGQKPIKGSPYPRGYYKCSGVrGCPARKHVERATDDPSMLIVTYEGEHIHS 295
                     69*************************887****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAVDLIGYTK MDGKISVQEV AVAGIRSMEN LIFQLNHYHK SSASSSSTST AISPEMAANQ  60
IDCREITDQT VSKFKKMISL LNRTGHARFR RGPTPPSPSS PSTTTGTETP NLQPLNFTKP  120
NSIGGTSVEI PIAAAKKTLT ISSANSSFIS SITGDGSVSY GRQSSSALHP AAAGKPPLSS  180
TSYKKRCHEH AKPEENISVK ISAVSGGRCH CTKRMKNRAK SVIRVPAISS KIADIPADEY  240
SWRKYGQKPI KGSPYPRGYY KCSGVRGCPA RKHVERATDD PSMLIVTYEG EHIHSKPPVS  300
IVLDPQRVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-92WRKY family protein