PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020682616.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | C3H | ||||||||
Protein Properties | Length: 177aa MW: 19780.5 Da PI: 8.1587 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.5 | 7.4e-06 | 114 | 135 | 5 | 27 |
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 +C+ ++ G+C+ G+ C+F H++ XP_020682616.1 114 ECHMYMM-GFCPNGPGCRFKHSK 135 7999999.*************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MDDSSGAFSF DFETALDAGG EGGGEPSAVL GQGLHGDPRA LAVPEIAVAP LDRRNFRRTV 60 CRHWLRGLCM KGASCGFLHQ YDKEKMPVCR FFRNFGECRE KDCLYKHTIE EIKECHMYMM 120 GFCPNGPGCR FKHSKLPGPP PPVEEVLKKI QQLSSLSSYG SSNRQFHPRN ASFNSFS |