PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020682529.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GRAS
Protein Properties Length: 472aa    MW: 50089.2 Da    PI: 5.9389
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020682529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS237.36.7e-731184703374
            GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +lLl++A+av+ gdl+   ++Larl+ +   ++g+p++R+a++f+ AL + l        + +p  + s  + + ++aa+k+fs++sPi++f+ +
  XP_020682529.1 118 DLLLRAAHAVEIGDLNSSLSILARLNFIlPCSTGSPLHRAAFHFKDALLSLLPI----ADRPIPEPPLSAIELVLRIAAHKAFSDLSPIPQFTSF 208
                     69*************************9889999***************99886....55667777788788*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     taNq++le+v+ +  +H iDfd++ G+QW ++ + La+R+     +pp lRiT+v+s   +++ e+   +++L++fA+ +g+++  +++   rl+
  XP_020682529.1 209 TANQTLLESVDAAPSLHLIDFDLGLGGQWSSFAHDLAARSraarLPPPPLRITAVVS---EETAETALAADNLRDFARGIGLRLTVEFV---RLS 297
                     *************************************99966666699*********...468899999*******************8...777 PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleak...lpre 278
                     +l     r+ pgEa+aV l   ++rl            +vL++v+++ ++vv vv+ e  + + +sF +rf+  leyy+a ++ ++a    +++ 
  XP_020682529.1 298 AL--AGVRLAPGEAVAVVLTPTIFRLI-----G----VSVLRFVRRVAARVVLVVDGEGYCgSVGSFRRRFAGGLEYYAAAMEVVDAWaaaAGAG 381
                     77..67788*****************8.....3....46**********************7778**************9988775541115555 PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +e+ + +Er+l++++i  +va++ a+       ++ Wre + +aG+  ++lse++++qa+ llr+ +++g++v  ++g+lvl Wk+r+L ++SaW
  XP_020682529.1 382 EEAVRRIERALFRPRIFAAVAAAAAA-------VGDWREVMASAGMVVAELSEFTESQAEWLLRRAPVEGFHVARREGALVLSWKGRELSATSAW 469
                     699999*****************998.......99************************************************************ PP

            GRAS 374 r 374
                     r
  XP_020682529.1 470 R 470
                     8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    
MKITKSSTGG DSQAALHHLT KPIDSSPLYE PTSVLDPHIT SSPSAAAAAA PASGGACPAP  60
SLPWDSASIP LALTSSASDD WSDPLSFLLA DMDDPCSFFP DLSHPTPPPP EAESSHLDLL  120
LRAAHAVEIG DLNSSLSILA RLNFILPCST GSPLHRAAFH FKDALLSLLP IADRPIPEPP  180
LSAIELVLRI AAHKAFSDLS PIPQFTSFTA NQTLLESVDA APSLHLIDFD LGLGGQWSSF  240
AHDLAARSRA ARLPPPPLRI TAVVSEETAE TALAADNLRD FARGIGLRLT VEFVRLSALA  300
GVRLAPGEAV AVVLTPTIFR LIGVSVLRFV RRVAARVVLV VDGEGYCGSV GSFRRRFAGG  360
LEYYAAAMEV VDAWAAAAGA GEEAVRRIER ALFRPRIFAA VAAAAAAVGD WREVMASAGM  420
VVAELSEFTE SQAEWLLRRA PVEGFHVARR EGALVLSWKG RELSATSAWR CR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-55GRAS family protein