PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020682168.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26222.6 Da PI: 9.4272 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.3e-18 | 83 | 133 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr++ +g+WvAeIr p++ r r++lg++++ae Aa a+++a+ kl+ge XP_020682168.1 83 LYRGVRQRQ-WGKWVAEIRLPRN---RMRIWLGTYDSAEAAACAYDRAAYKLRGE 133 59****999.**********965...59*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MNLPIAETLA PFTSPENIPS TLSQIILSGS NPLDSVFAHI SPQAPPPPAA SPPHTPIGSS 60 IYLQLADLLR SASPHSSAAR KKLYRGVRQR QWGKWVAEIR LPRNRMRIWL GTYDSAEAAA 120 CAYDRAAYKL RGEYARLNFP AMRDADSQCS DKLREVRSAV DSKIQAISQR IVKQKRLKRE 180 KADAKGKQPE TSSSSSSSSV SGERVTGDGA CGEENDGGEC WLSRMPSFDP EIIWEVLAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64380.1 | 6e-36 | ERF family protein |