PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020682089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 717aa MW: 78355.6 Da PI: 5.3377 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.7 | 4.3e-32 | 295 | 352 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgsefprsYY+Ct+ +Cpvkkkvers +++v+ei+Y+g Hnh+k XP_020682089.1 295 EDGYNWRKYGQKHVKGSEFPRSYYKCTFVNCPVKKKVERSL-EGHVTEIVYRGAHNHPK 352 7****************************************.***************85 PP | |||||||
2 | WRKY | 103.2 | 1.4e-32 | 507 | 565 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+++d k v++tYeg+Hnh+ XP_020682089.1 507 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHD 565 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 717 aa Download sequence |
MAGIDDSVSI FADWAASNPS PRTFISKFFN EDTCSRPFPD LGDNTHFGFA EPENHKSAMV 60 NNEEVEKPAL VHSSDIFLEP VQFNVSKSSS KGALSERMAA RAGFSTLTVN TSRNGTESVI 120 YSPSNKRCSY VLLSPGVSPT TLLESPVFLS NAMAQPSPTT GKFPFARAED SNMFSTLISE 180 ETDKTNVQLI EDVHADAFTF PRLGSSFPFL SPSENKFALS IEEERTLVNM GSSLQPDLKQ 240 PVGFTEASEA KEIAEDVKAD SFLANESSPP DDNQNVETDP KGGEFSSMAS SAAEEDGYNW 300 RKYGQKHVKG SEFPRSYYKC TFVNCPVKKK VERSLEGHVT EIVYRGAHNH PKPPSNRRSS 360 TSSSQSFSDT QMDNSDYHVI NANFDGKPTL VNAQNGNGGS EWRGDGIEAV SSTSIAEFAT 420 SNSMQTISGS RYDGSEALNL PSAMSNDEEE DDGATHGSFS MGCDAEGEEM DSKRRKLDLC 480 TIDMSAASRA MREPRVVVQT TSEVDILDDG YRWRKYGQKV VKGNPNPRSY YKCTNPGCTV 540 RKHVERASHD LKSVITTYEG KHNHDVPTAK TSNHQSTGLS NSTATGIHPT HSLHRKAEPI 600 QEILMRFENH APVDPFALPS RDPQFGTAAG FAFGFGHQGL TSLGIGSLGP MGPLRMPAFA 660 PVQSYLEHQR KVDDGGFIIP KGEPKEEPIL ESDLPSIANA PKGYYQFANR LSLGPYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 1e-124 | WRKY family protein |