PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020681746.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GRAS
Protein Properties Length: 403aa    MW: 45415.9 Da    PI: 7.012
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020681746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS373.62.6e-114534023373
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lLl+cAe +++ d+++a+++++ l +++s +gd+  Rl+++ft AL+ rl+         lpps+ ++       ++   f++++P+l+fshlt
  XP_020681746.1  53 RLLLHCAELIHHADFAAARHAISILTTTSSATGDAADRLTHHFTSALSLRLHL--------LPPSPHDP-------NFILSFNQLTPFLRFSHLT 132
                     79**************************************************8........78888762.......344459************* PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aNqaIleav+g++ +Hi+Dfd ++GlQWp+Llqa+a+R+   +pp+++iTg g     +   l++t +rL++fA++lg+ f+f++l  +     +
  XP_020681746.1 133 ANQAILEAVDGHRSIHILDFDTGHGLQWPPLLQAIADRShfPNPPTIQITGTGT----DPSLLSQTSRRLQSFADSLGLCFHFHPLCISP---TT 220
                     ***************************************88889**********....9**************************95555...55 PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                       +++ + gE laVn+ + lh+l ++++  e   +++L ++k+++P vv+v+e+ea+h+s+ Fl+rf+eal+yysa+f+slea+lp+ s+er++v
  XP_020681746.1 221 SFSFQANGGEILAVNCTMFLHKLIKDDGLDEL--KQFLLAIKGMNPAVVTVAEKEAKHSSPLFLQRFAEALSYYSAVFESLEATLPPSSRERMVV 313
                     55888999****************87776666..9************************************************************ PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                     E++++grei+++va eg+ r+erhe++e+W++ +++aGF   pls++a +qa+lllr ++ s+gy+ve  +gs++lgWk++pL+svS+W
  XP_020681746.1 314 EKMWIGREIEDIVAGEGEGRKERHERFERWENLMKNAGFLIKPLSYFALAQARLLLRLHYpSEGYMVEMMKGSMFLGWKSKPLFSVSSW 402
                     ***************************************************************************************** PP

Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MLAISSPPFD QMLTSFTSHE EDHNQLQQQQ QHHHLLLHPR PEPASNRSVQ SHRLLLHCAE  60
LIHHADFAAA RHAISILTTT SSATGDAADR LTHHFTSALS LRLHLLPPSP HDPNFILSFN  120
QLTPFLRFSH LTANQAILEA VDGHRSIHIL DFDTGHGLQW PPLLQAIADR SHFPNPPTIQ  180
ITGTGTDPSL LSQTSRRLQS FADSLGLCFH FHPLCISPTT SFSFQANGGE ILAVNCTMFL  240
HKLIKDDGLD ELKQFLLAIK GMNPAVVTVA EKEAKHSSPL FLQRFAEALS YYSAVFESLE  300
ATLPPSSRER MVVEKMWIGR EIEDIVAGEG EGRKERHERF ERWENLMKNA GFLIKPLSYF  360
ALAQARLLLR LHYPSEGYMV EMMKGSMFLG WKSKPLFSVS SWF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.12e-85GRAS family protein