PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020681735.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | CO-like | ||||||||
Protein Properties | Length: 420aa MW: 45731 Da PI: 6.1316 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 18.9 | 3.3e-06 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +++++ +C+++ lC +C + H+ H++ XP_020681735.1 4 LCDFCGDQRSMVYCRSDAASLCLSCDRNVHSAnalsrrHSR 44 7*****************************65677777766 PP | |||||||
2 | zf-B_box | 20.9 | 7.6e-07 | 46 | 86 | 4 | 38 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+++ ++++++ C + + lC++C ++H+ H+ XP_020681735.1 46 LLCERCYSQPATIRCIEESISLCHNCDWNGHSAlasssgHK 86 57*****************************6577777776 PP | |||||||
3 | CCT | 65.4 | 1.7e-22 | 363 | 405 | 1 | 43 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R +a++RYkeK+k RkFeKkirY+sRKa+A++R+RvKGrFvk XP_020681735.1 363 RGNAVMRYKEKKKARKFEKKIRYASRKARADTRKRVKGRFVKV 405 7789*************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 420 aa Download sequence |
MGSLCDFCGD QRSMVYCRSD AASLCLSCDR NVHSANALSR RHSRTLLCER CYSQPATIRC 60 IEESISLCHN CDWNGHSALA SSSGHKKQRI SCYSGCPSAA ELANIWSFVL EFPPITDSRC 120 EQGMGLMSIN ENSASTYWGP LPNSCNADIA DESKINNLEN LNKPNIHIGS STSSPTPMIC 180 SADQEAGSVD STTPKVHAIS ALLKPSNAGM KETGIDKDDF YDDFSVTVDL SFENYEELFG 240 TSHIHSEKLF DDVGIDSFFE MESSAANSNC QGEFTAEVKS LHAGCSNAVS ADSVMSTMVA 300 KADSSMSIPA RQAHSSLSVS FSGLTGESSA GDYQECGVTS MLLVGETPWY APGPESSIQA 360 TNRGNAVMRY KEKKKARKFE KKIRYASRKA RADTRKRVKG RFVKVGEAYD YDPLCQTRSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07650.2 | 1e-117 | CO-like family protein |