PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020681337.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 274aa MW: 31283.1 Da PI: 5.2565

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020681337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.3e-52	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yL+++++++ l++ +i+evd+yk++PwdLp k+ ++kewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v + XP_020681337.1 13 LPPGFRFHPTDEELVVHYLCRRTAQQCLPV-PIIAEVDLYKYNPWDLPDKAMFGTKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPA 106 79*************************9.88***********7777899*********************************987 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++vg+kk Lvfy+g+apkg+ktdW+mheyrl XP_020681337.1 107 rSGRAVGIKKALVFYDGKAPKGVKTDWIMHEYRL 140 68899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MGRSRDAEAE LNLPPGFRFH PTDEELVVHY LCRRTAQQCL PVPIIAEVDL YKYNPWDLPD 60 KAMFGTKEWY FFTPRDRKYP NGSRPNRAAG RGYWKATGAD KPVAPARSGR AVGIKKALVF 120 YDGKAPKGVK TDWIMHEYRL ANVNRSAKSN GSLRLDDWVL CRLYNKKNNW EKMATSSMEE 180 NEDAKSESLR TPESGIEMPD LDEFGDAGFG LEMQVEASPA IKEDYDWYSD LNLGDLQSNL 240 GDFQVPVVDF SNQDYFFFNF DSPKNRAVSN LTSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63790.1	6e-90	NAC family protein