PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020681182.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 302aa    MW: 33680.4 Da    PI: 8.8633
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020681182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.82.5e-5081321128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtd+elvv+yL++k++g ++ +  +i+++d+yk++Pw+Lp ++  +ekewyfFs+r++ky++g+r+nra+ sgyWkatg dk++ + 
  XP_020681182.1   8 LPPGFRFHPTDDELVVHYLCRKCAGLPIAV-PIIADLDLYKFDPWQLPGMAPYGEKEWYFFSPRERKYPNGSRPNRAAGSGYWKATGADKPIGT- 100
                     79**************************99.88***************8777899*************************************99. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + v +kk Lvfy g+apkgek++W+mheyrl
  XP_020681182.1 101 -PKPVAIKKALVFYAGKAPKGEKSNWIMHEYRL 132
                     .789***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MNAGDLQLPP GFRFHPTDDE LVVHYLCRKC AGLPIAVPII ADLDLYKFDP WQLPGMAPYG  60
EKEWYFFSPR ERKYPNGSRP NRAAGSGYWK ATGADKPIGT PKPVAIKKAL VFYAGKAPKG  120
EKSNWIMHEY RLADVDRSAR RKNSLRLDDW VLCRIYNKKG GAIAKHAASD RKSSMARIFR  180
QPATPETPEQ KPNILPQTSA PPPQQYTDLL YFDTSESLPR LHADSSCSEH VLSPDFTCER  240
EVQSQPKWGE IERALGLGIN NIDATAGAGA GAGGFSMDDG MFSPLLRGNS FQDLMMYLQK  300
PF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-128NAC family protein