PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020681146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 205aa MW: 23026.8 Da PI: 6.5191 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 87.8 | 9.1e-28 | 45 | 102 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++k+s++pr+YYrC+s+ gC++kk+ver+++d+++++itY+++ nh+ XP_020681146.1 45 DYWSWRKYGQKPIKDSPYPRAYYRCSSSkGCSAKKQVERCKKDESLIIITYTSSDNHP 102 99************************998***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MDGFPSKQLM MDASDPNRKK MAQKTVVIVR AEAKLGKHGG EAPPDYWSWR KYGQKPIKDS 60 PYPRAYYRCS SSKGCSAKKQ VERCKKDESL IIITYTSSDN HPGPVPSSLN KSINSSRIPF 120 LNEDCRSSEK NRNVEDNYES SIVKCAQEST EKVQGEGDTI SSSIEPVNCS MEDNDIFDEL 180 DELPLPSSFN SLVRSSIFYE KIIPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 4e-32 | WRKY family protein |