PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020681077.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 321aa    MW: 36574.6 Da    PI: 6.3192
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020681077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.25.9e-48111373128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                     pGfrFhPt+eel+ +yL++ ++gkkl++ ++i ++++y ++PwdLp+ +k +e+ewyfF++rd+++a+g r+nr+t++g+Wkatg+d+++ s+  
  XP_020681077.1  11 PGFRFHPTEEELLEFYLRRATAGKKLNF-DIIGTLNLYLYDPWDLPALAKMGEREWYFFVPRDRRQANGGRPNRTTERGFWKATGSDRPIRSAan 104
                     9*************************99.99***************8888899**************************************9876 PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++l+glkktLvfy+grap+g+ktdWvm+eyrl
  XP_020681077.1 105 PRRLIGLKKTLVFYRGRAPHGNKTDWVMNEYRL 137
                     6778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MEKNGSELDL PGFRFHPTEE ELLEFYLRRA TAGKKLNFDI IGTLNLYLYD PWDLPALAKM  60
GEREWYFFVP RDRRQANGGR PNRTTERGFW KATGSDRPIR SAANPRRLIG LKKTLVFYRG  120
RAPHGNKTDW VMNEYRLPDV LPFPTSLSVP QPPKEDIVLC KIYRKATSQK ELEQRAAMEA  180
SRASQGCTVS ATSSDQENLQ KISFDNNEVI MDMKVEFELP PFEFNKEVAE VSSAETQPPI  240
MPLLESSADI EWSALQPEPS VMRPPASPAS KTPAVRQLPS LPALQVPNHM SFDLVQDSFL  300
SQLRSPWLDQ WSPLYASLLN F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-87NAC family protein