PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020680999.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GRAS
Protein Properties Length: 501aa    MW: 54915.3 Da    PI: 6.2816
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020680999.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS284.23.8e-871044862374
            GRAS   2 velLlecAeavss..gdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykal.ppsetsekn...sseelaalklfsevs 88 
                      +lL+++Aea+s   + + la+ +L rl+el    ++g+ ++Rl+ +fte+L+a l +  + ++    ++++ +  +    +e+l+a++l++++s
  XP_020680999.2 104 LHLLTAAAEALSGdlNGQDLARVILIRLRELlsTDNAGSGIERLTNHFTEGLNALLDG--DATFPRRsESNQFPY-RhypAAEVLTAFQLLQDMS 195
                     69999****9998445566************53334569******************9..322222212222222.2466*************** PP

            GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl 181
                     Pi  f+hltaNqaI eav+ge rvHi+D+di +G+QW++L+q++asR+   +pp+l+iT+v + +  s+ + +etg+rL++fA+++g pf+f++ 
  XP_020680999.2 196 PIASFGHLTANQAIIEAVAGECRVHIVDYDIAEGIQWASLIQEMASRNdgLPPPHLKITAVTNGKRRSASAAKETGRRLSDFAASVGQPFSFRLC 290
                     ************************************************555699*********9999***************************9 PP

            GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyysalfdsle 272
                       ++ + ++l + ++ +gE ++Vn+vl+  ++   ++s++s   ++L    +l++++v+++e++    a  +++sFl+rf+  le y+a+ +sle
  XP_020680999.2 291 RLDQHKRFHLAAVKLVKGEPVVVNCVLNPGQVGYGHGSVTS-VGSFLVGAVGLRARLVTLIEEDigaaAGEEKGSFLRRFMIELERYMAIWESLE 384
                     9999999**************************99999999.99********************6543334667********************* PP

            GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrp 366
                     a++p++ + r +vEr++lg++i  +v  +  +   r+  +e+  e++ +aGF  v ls ++ +qa+lll  ++ dgy+ve++ s+ l+l Wk+r+
  XP_020680999.2 385 AGFPKQGRVREMVERVILGPRIIGAVRRAYGWNGIREPIVEECGEWMAAAGFARVGLSFSNLCQARLLLGLFN-DGYKVEDDaSNKLLLSWKSRR 478
                     *******************************999999999999999***************************.******76599999******* PP

            GRAS 367 LvsvSaWr 374
                     L+s+S+W+
  XP_020680999.2 479 LLSASVWT 486
                     *******6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    
MELVLDDLPA LIFSAGSSTT TTTTTTTTVN DDISWEDWLS PHLNWSHEDF HPFLAAVGDH  60
YFATLPHNIQ NQSSSTSSTT TTPEEDPTPP TKFPIESNKT QRLLHLLTAA AEALSGDLNG  120
QDLARVILIR LRELLSTDNA GSGIERLTNH FTEGLNALLD GDATFPRRSE SNQFPYRHYP  180
AAEVLTAFQL LQDMSPIASF GHLTANQAII EAVAGECRVH IVDYDIAEGI QWASLIQEMA  240
SRNDGLPPPH LKITAVTNGK RRSASAAKET GRRLSDFAAS VGQPFSFRLC RLDQHKRFHL  300
AAVKLVKGEP VVVNCVLNPG QVGYGHGSVT SVGSFLVGAV GLRARLVTLI EEDIGAAAGE  360
EKGSFLRRFM IELERYMAIW ESLEAGFPKQ GRVREMVERV ILGPRIIGAV RRAYGWNGIR  420
EPIVEECGEW MAAAGFARVG LSFSNLCQAR LLLGLFNDGY KVEDDASNKL LLSWKSRRLL  480
SASVWTIPTR MSPSPSPSLA I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.18e-85GRAS family protein