PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020680977.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 323aa    MW: 35258.2 Da    PI: 8.4407
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020680977.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-20145194255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+++tae+Aa a+++a+++++g
  XP_020680977.1 145 QYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTYDTAEGAAIAYDEAALQFKG 194
                     69*******.**********94....45**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDHKREAHVG AFSTLPFLSF SLDSCRDGRK PVTGGGKTAS VCEKITKVDR RHGKRPLSAT  60
VKEEKEKEAE HMFSHYTSSR ADYDTSAMVS ALAHVIAGGS SAGEAQSQAT TSPPLRAAAA  120
ATSVESMVRD PSQIAEEQET ERRRQYRGVR QRPWGKWAAE IRDPKKAARV WLGTYDTAEG  180
AAIAYDEAAL QFKGTKAKLN FPERVQGRTE LGFVVSREIP TRRSKQLTTM QASVYPDLLQ  240
YAQLLQSGDD NLHNVAFGLY GGESFMSESS SMMEASSSSI SFTGSSMTNS VRPEVMLNFG  300
SSDYCSSSLP KDDQSGRKDG GNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-24ERF family protein