PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020680835.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 672aa MW: 75836.8 Da PI: 7.1015 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 91.7 | 1.2e-28 | 57 | 199 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 lp+G++F+Ptd el+ e+L+ +v + + ++e+i+++d i++++P++Lp vk++ ++ +fF++++++yatg +k+r+ + XP_020680835.1 57 LPAGVKFDPTDVELL-EHLAGNVGAGMskahIFIDEFIPTLDgdqgICYTHPENLP-GVKKDGSSAHFFHRTSNAYATGCKKRRKirneysesEE 149 799************.899999887773444333445666656677**********.67788899******************985666666555 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+v++ +g l+g kk++v+y g+ k+ k +Wvmh+y+l XP_020680835.1 150 RVRWHKTGKTKPVVE-SGVLKGWKKIMVLYrsLGKGCKPDKDNWVMHQYHL 199 889************.999***********5447888999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 672 aa Download sequence |
MARAWLINSR GIAKKVKNAA LYSNYQIRDL GTEANRECPN CKYVIDNSDV SLDWPGLPAG 60 VKFDPTDVEL LEHLAGNVGA GMSKAHIFID EFIPTLDGDQ GICYTHPENL PGVKKDGSSA 120 HFFHRTSNAY ATGCKKRRKI RNEYSESEER VRWHKTGKTK PVVESGVLKG WKKIMVLYRS 180 LGKGCKPDKD NWVMHQYHLG TNEDEKDGEL VVSKVFYQQH TKHVGSGEAE ILPDELDSSN 240 IKNCPRTPKT TAPQPPRFKM NSLREADQHD HLPLPVQEKR PEEESMPSPF PIICLKDEHN 300 GSACWADESQ AIQEPETEKI YESLLCHEVL FPFTSIGGSS PQFDHLEIAD GNKEQLKRDA 360 NTDDGFSCLE DIDIDTPSDF HLSMRNLGSL NQFLGIHAVK TNSGILLHQQ HYAKAIVERA 420 GMTQSKPVST PIACKITTSS TSQEPFSNPQ LYRHIIGSLQ YLTPTRPDIQ FAVHQLCQHM 480 QHPLNQHFDA LKRLLRFING TTNTGIQFHS QDLTLRGYVD ADWASNSLDR KSISGHCHFM 540 GNSLISWQVK KQNTIARSST EAEYRALAFA TAEIIWLRQL LEDFHIPQTN PTVIYCDNTS 600 AIALANNPVF YARTKHIEVD CHFIREHIRN KIITVHHICS ADQLADFFTK ALPTTRFQLM 660 ANKLTAALQP QV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 139 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01600.1 | 1e-81 | NAC family protein |