PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020680286.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 198aa MW: 22498.4 Da PI: 6.1524 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 117.6 | 1.2e-36 | 10 | 123 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deelv ++L++k++ +++ ++i+++d+++++PwdL+ k+ ++ k wyfFs+r + nrat +gyWk+ g d+ v++ XP_020680286.1 10 LPPGFRFFPSDEELVRHFLRRKASMLPCHP-DIIPTLDLLHFDPWDLHCKALKGGKYWYFFSHRTE--------NRATPNGYWKQVGVDEFVKD- 94 79*************************999.99**************966667899******9855........89************999988. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfy g+a+ g kt+W+mhey l XP_020680286.1 95 ----VGMKKTLVFYVGDASGGMKTNWIMHEYCL 123 ....***************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MGEDAGAGNL PPGFRFFPSD EELVRHFLRR KASMLPCHPD IIPTLDLLHF DPWDLHCKAL 60 KGGKYWYFFS HRTENRATPN GYWKQVGVDE FVKDVGMKKT LVFYVGDASG GMKTNWIMHE 120 YCLLDSEASS SSRSNGRKLS RKKGQAKAGD ANYRWVVCRV CESGHSVQPC SQDEAMELSC 180 LDEIFLSFDD YDEVSLPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 5e-62 | NAC family protein |