PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020680207.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 292aa MW: 31204.2 Da PI: 7.8522

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020680207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.2	4.8e-40	48	108	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+al+cprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ss XP_020680207.1 48 PEQALRCPRCDSTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNKRSS 108 7899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MEISTGHHHQ AMANHQLDHE VLNCPKSSSS TSPAHHLQQE IKKPRPQPEQ ALRCPRCDST 60 NTKFCYYNNY SLSQPRYFCK GCRRYWTKGG SLRNVPVGGG CRKNKRSSPS TSNSSSTSKK 120 PALQDNQDQV NPTSLLIPSM PLPPPLTYDP SDLTLAFSSF HSHDPFLLGN PNPNPNPNPN 180 GAAFLDILRG GDHSQNHGGG GGGLHSFYYG FSGGGDDIRG MLSFDGGVGG CSDSTTVAAE 240 TGAVVGNSDH PASNAHSTST SHGSLGMESG RDYWNGVPSN SSWHGLINSS LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	4e-36	Dof family protein