PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020679875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YC | ||||||||
Protein Properties | Length: 153aa MW: 16650 Da PI: 5.3794 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 49.6 | 8.9e-16 | 32 | 113 | 19 | 99 |
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavt.rtdifdflvdivprd 99 ++P r+k+i+k+ded+k++s+ea l+s + elfi ++ ++ + a ++r+t+k d+ +a+t ++ + dfl+d p+ XP_020679875.1 32 PSFPTGRVKRIIKMDEDIKKVSSEALFLISLSTELFIEFMAEKAGNAAARKRRKTVKLEDLRTAITgHSPTADFLLDCLPET 113 579***********************************************************999846889******99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MEAIAELAPV NQPSSDAEET GEPGSDAGVL TPSFPTGRVK RIIKMDEDIK KVSSEALFLI 60 SLSTELFIEF MAEKAGNAAA RKRRKTVKLE DLRTAITGHS PTADFLLDCL PETSKPPPIL 120 AGKKNESEKP LPPGARRIDE FFSKSAEIVQ QSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 1e-31 | NF-YC family protein |