PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020679682.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 216aa MW: 23720 Da PI: 8.6067 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 89.4 | 3.4e-28 | 24 | 73 | 4 | 58 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +Y+eCl+NhAa++Gg+a+DGCgEfm+ + ++lkCaACgCHRnFHRre + XP_020679682.2 24 SKYRECLRNHAAAMGGQAYDGCGEFMAG-----EEESLKCAACGCHRNFHRREGS 73 68*************************7.....4589***************965 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence |
MDLSLVPYVE STAAEKTAAA AGDSKYRECL RNHAAAMGGQ AYDGCGEFMA GEEESLKCAA 60 CGCHRNFHRR EGSPTHRPLL KHAMLPAPSP VAFFPPPPLP FHQIPTPVSP DPGRGASETP 120 PRREEGPMRK RYRTKFTAEQ KEKMWIFAEK LGWRIQKHDD EKLEEFCVEI GVKRHALKVW 180 MHNHKNNLST SAITTAAGHG PSSAAAADAA APTIRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24660.1 | 7e-47 | ZF-HD family protein |