PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020679668.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 501aa MW: 56720.3 Da PI: 6.8189

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020679668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.6	5.1e-09	299	336	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_020679668.1 299 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 336 564459******************************88 PP
2	BELL	114.4	6.1e-37	160	229	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+kakLls+leeVd+rYk+y+eq+++v+ssFe +ag g+a+ Y +lA+ka+SrhFrcL+d i +qi XP_020679668.1 160 IELQKRKAKLLSMLEEVDRRYKRYCEQMKAVVSSFEDIAGEGAARTYSQLASKAMSRHFRCLRDGINGQI 229 69******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MMSHESHHLH HQHPFNEFSA MVGNSSAMNN FETGVGHDLF HMNMSSSNHN WRGFSQDSDA 60 TVSVAAASAW PLESDLHANQ VQSLSLSLYN PPPQPPSFQL SSHHPFHIKS CKYLLPTQEL 120 INEFCSLGGG NSFKRNNFAK PMDDSSSSWS QQSLYSMEPI ELQKRKAKLL SMLEEVDRRY 180 KRYCEQMKAV VSSFEDIAGE GAARTYSQLA SKAMSRHFRC LRDGINGQIK ATRRAMGENE 240 AAATATGLTR GETPRLKLLD QCLRQQKAFQ QAGMMESHPW RPQRGLPDRS VSILRAWLFE 300 HFLHPYPSDV DKHILARQTG LSRSQVSNWF INARVRLWKP MVEEMYMEEL KEDDKNSQSS 360 HATTMQEAGT SCNNPYSNPN PNPSPSSHLG AFEDRKPKTC HFQIDEQNSL SSIINNINTH 420 HHNPNPNPNQ NFGIIDTDFG SYHGHELTLS LQQHERPLLF TRELPIGDDG DEVQFSILEG 480 ESQNIPYRNL MGAQLLHDLA G

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MMSHESHHLH HQHPFNEFSA MVGNSSAMNN FETGVGHDLF HMNMSSSNHN WRGFSQDSDA  60
TVSVAAASAW PLESDLHANQ VQSLSLSLYN PPPQPPSFQL SSHHPFHIKS CKYLLPTQEL  120
INEFCSLGGG NSFKRNNFAK PMDDSSSSWS QQSLYSMEPI ELQKRKAKLL SMLEEVDRRY  180
KRYCEQMKAV VSSFEDIAGE GAARTYSQLA SKAMSRHFRC LRDGINGQIK ATRRAMGENE  240
AAATATGLTR GETPRLKLLD QCLRQQKAFQ QAGMMESHPW RPQRGLPDRS VSILRAWLFE  300
HFLHPYPSDV DKHILARQTG LSRSQVSNWF INARVRLWKP MVEEMYMEEL KEDDKNSQSS  360
HATTMQEAGT SCNNPYSNPN PNPSPSSHLG AFEDRKPKTC HFQIDEQNSL SSIINNINTH  420
HHNPNPNPNQ NFGIIDTDFG SYHGHELTLS LQQHERPLLF TRELPIGDDG DEVQFSILEG  480
ESQNIPYRNL MGAQLLHDLA G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	2e-99	TALE family protein