PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020679365.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 166aa MW: 18041.3 Da PI: 6.8903 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.2e-17 | 35 | 85 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr p + +r +lg+f + +Aa+a+++a+++l+g XP_020679365.1 35 CSYRGVRQRT-WGKWVAEIRMP-----NhgARLWLGTFNSSLDAARAYDHAARSLYG 85 67*****999.**********9.....336***********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MPTVTNKEKK KKCCPLRRSR KGCMKGKGGP ENPFCSYRGV RQRTWGKWVA EIRMPNHGAR 60 LWLGTFNSSL DAARAYDHAA RSLYGDCACL NLPHVGLATA SIGEESGKEE ETALFDGGAG 120 LDDLEEYVMR LPKAEDFGLD AFHDVAGRCG GFGDDGVGGG REVDEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40350.1 | 1e-38 | ERF family protein |