PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020679286.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 437aa MW: 50029.7 Da PI: 6.5748

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020679286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.6	2.6e-49	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGf FhPtd el+++yLk+k g k++l evi+e+diyk ePwdLp+ ++ +++++w+fF++rd+ky++g+r+nrat++gyWk+tgkd+++ XP_020679286.1 9 LPPGFGFHPTDVELISHYLKRKNLGLKVDL-EVIPELDIYKREPWDLPAccQIPTRDSKWHFFTSRDRKYPNGTRANRATEAGYWKSTGKDRNIR 102 79*************************9.99***********6346677999********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kktLvf++gr p g++tdW+mhey + XP_020679286.1 103 F-HNQVIGTKKTLVFHEGRPPYGKRTDWIMHEYYM 136 9.999**************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MDALKAVSLP PGFGFHPTDV ELISHYLKRK NLGLKVDLEV IPELDIYKRE PWDLPACCQI 60 PTRDSKWHFF TSRDRKYPNG TRANRATEAG YWKSTGKDRN IRFHNQVIGT KKTLVFHEGR 120 PPYGKRTDWI MHEYYMDEKE CKKTPGMLDT YVLCRVTKRD GFVVEGENVS ARSEDIDGQK 180 FVKDLDSSQH EGVQQDKSSP SESTEDLDSW LNELIDPNFD GSVDFYCLTE LPSSVEPATE 240 LQASQTRVSN LIPKDEPLDF GFLPEDILGI LKDDLIVMPE ITELLAVDHS PTISLNQQRN 300 FGAEDFKKEM PNLSQNSNFI QIRERHERPV ADTFPHRVKL VRTNKMESRN SSAVRQTIKC 360 AQVDHCISAN SKLKHPTKLE VKDETSRKES KQNYNRIKAG IDCYFLRACM IGAAGLIIYF 420 LFRDAVHISG NFPVLEL

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MDALKAVSLP PGFGFHPTDV ELISHYLKRK NLGLKVDLEV IPELDIYKRE PWDLPACCQI  60
PTRDSKWHFF TSRDRKYPNG TRANRATEAG YWKSTGKDRN IRFHNQVIGT KKTLVFHEGR  120
PPYGKRTDWI MHEYYMDEKE CKKTPGMLDT YVLCRVTKRD GFVVEGENVS ARSEDIDGQK  180
FVKDLDSSQH EGVQQDKSSP SESTEDLDSW LNELIDPNFD GSVDFYCLTE LPSSVEPATE  240
LQASQTRVSN LIPKDEPLDF GFLPEDILGI LKDDLIVMPE ITELLAVDHS PTISLNQQRN  300
FGAEDFKKEM PNLSQNSNFI QIRERHERPV ADTFPHRVKL VRTNKMESRN SSAVRQTIKC  360
AQVDHCISAN SKLKHPTKLE VKDETSRKES KQNYNRIKAG IDCYFLRACM IGAAGLIIYF  420
LFRDAVHISG NFPVLEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-67	NAC family protein