PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020679134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 181aa MW: 20350.6 Da PI: 5.2861 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.6 | 2e-15 | 17 | 59 | 2 | 48 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 +ykGVr +k +g+Wv+e+r p++ r r++lg+++++e+Aa+a +a XP_020679134.1 17 KYKGVRKRK-WGKWVSEVRLPNS---RERIWLGSYDSPEKAARAFDA 59 8*****999.*******999833...5*****************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MTDQAESSAA AAASAAKYKG VRKRKWGKWV SEVRLPNSRE RIWLGSYDSP EKAARAFDAG 60 SFLLRGDRAS LNFPDRAQEI AMYCARRNPT AQQIQTAAAR YAHADLPAPS QPSQPVLQVA 120 EESPPSPATM TSQWELLEQF MAPAFPHIDE LHYEFHLDER LDQMDVESGW DSDHSPSLWT 180 F |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 25 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74930.1 | 1e-36 | ERF family protein |