PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020679105.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 600aa MW: 67135.6 Da PI: 4.5495

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020679105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.7	3.3e-51	39	165	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppG+rFhPtdeelv +yLk+k+ +++++ ++ e+d+yk+ePw+Lp k +++++k+w+fFs+rd+ky++g+r+nratk+gyWkatgkd+ + + XP_020679105.1 39 PPGVRFHPTDEELVLFYLKRKICRQRIKP-AMVGEADVYKCEPWELPeKsLLRKGDKQWFFFSPRDRKYPNGSRSNRATKHGYWKATGKDRGISH 132 8***********************999.78**********95346677999*********************************9 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ g kktLv+y+grapkg++tdWvmhey+l XP_020679105.1 133 -HSKTAGNKKTLVYYRGRAPKGVRTDWVMHEYTL 165 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MGAAADCSAP VGRRISSACD DDEEYQDVGR QLGESKRWPP GVRFHPTDEE LVLFYLKRKI 60 CRQRIKPAMV GEADVYKCEP WELPEKSLLR KGDKQWFFFS PRDRKYPNGS RSNRATKHGY 120 WKATGKDRGI SHHSKTAGNK KTLVYYRGRA PKGVRTDWVM HEYTLDENFL VSFKNMQDSY 180 ALYKLFMKSG PGPKNGEQYG APFREEEWDD VAVDESFMDQ NDGDGMSAAI LTSNSIPVTF 240 SEGCDTSPVC DLEDLLFHLS QEQEIVQGDL DFSAYTSDLS KVDLEPENGS HVMNLSYVDA 300 DDSFLGIDTG GENSSMEMRF QNIQPELAHS QPIGLPNMIS NQHIVTTDEE FLEIKDLNDP 360 MTSFYLDDIT DRNLTFDTDV FFDPFDQFDA NMLLTESLGV PMDPFDQFNV NMLLTESLGV 420 PLDPKTPHHH FDSFSEEDPQ NNALHISSQL WAHEENYNLT TFANTNEVVA LTPPAAGFPI 480 ASNLPSTSEI HFVEQIGPAE SPSPSWFNST LSGFLHSVPS SPAFASENAL ISRAFERVSS 540 FRAAQVNPQQ RASASGGHRS NDRGYLFISG LVGIVAVFSV LIVGTAFQVF KGLWGRFISS

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MGAAADCSAP VGRRISSACD DDEEYQDVGR QLGESKRWPP GVRFHPTDEE LVLFYLKRKI  60
CRQRIKPAMV GEADVYKCEP WELPEKSLLR KGDKQWFFFS PRDRKYPNGS RSNRATKHGY  120
WKATGKDRGI SHHSKTAGNK KTLVYYRGRA PKGVRTDWVM HEYTLDENFL VSFKNMQDSY  180
ALYKLFMKSG PGPKNGEQYG APFREEEWDD VAVDESFMDQ NDGDGMSAAI LTSNSIPVTF  240
SEGCDTSPVC DLEDLLFHLS QEQEIVQGDL DFSAYTSDLS KVDLEPENGS HVMNLSYVDA  300
DDSFLGIDTG GENSSMEMRF QNIQPELAHS QPIGLPNMIS NQHIVTTDEE FLEIKDLNDP  360
MTSFYLDDIT DRNLTFDTDV FFDPFDQFDA NMLLTESLGV PMDPFDQFNV NMLLTESLGV  420
PLDPKTPHHH FDSFSEEDPQ NNALHISSQL WAHEENYNLT TFANTNEVVA LTPPAAGFPI  480
ASNLPSTSEI HFVEQIGPAE SPSPSWFNST LSGFLHSVPS SPAFASENAL ISRAFERVSS  540
FRAAQVNPQQ RASASGGHRS NDRGYLFISG LVGIVAVFSV LIVGTAFQVF KGLWGRFISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	4e-89	NAC family protein