PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020679046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ZF-HD | ||||||||
Protein Properties | Length: 147aa MW: 17165.6 Da PI: 10.3245 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 62.8 | 6.8e-20 | 3 | 54 | 3 | 57 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 +v+Y+eClkN+ ++ G h+vDGC+ f + ++ +a ++CaAC CHR+FHR++ XP_020679046.1 3 AVEYRECLKNQCVAPGFHTVDGCQFFFSGND---PSAVFNCAACSCHRSFHRKNF 54 799*********************9999844...46899**************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MAAVEYRECL KNQCVAPGFH TVDGCQFFFS GNDPSAVFNC AACSCHRSFH RKNFLKREPE 60 RSPSTAESST SRPRAGGIRR KKELFRRRRR RFTAEQKEKM LACASLLGWR VGWLRAEVES 120 FCEEVGIEEK AFFNWMRNNK RKYETKP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 79 | 91 | RRKKELFRRRRRR |
2 | 86 | 91 | RRRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 2e-25 | ZF-HD family protein |