PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020678982.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 165aa MW: 18075.4 Da PI: 11.9337 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.7 | 0.0005 | 97 | 132 | 15 | 55 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++++ L +l+P + kKl a++L ++ +Y+ Lq XP_020678982.1 97 KVRDRLRVLSRLVPGC-----KKLPAASVLSETADYVAALQ 132 78999999*******9.....9***************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 165 aa Download sequence |
MSKWQSKKQQ WIYGRRLLEA LRSARSGRTG PLVIKKAADS ALALSVRGQS RWSRAILFGP 60 CRGGKPKLKL KACSKIPRHR PFLSAGKLVA AQTKGRKVRD RLRVLSRLVP GCKKLPAASV 120 LSETADYVAA LQMQVNTMRV LAEVLSTSAV VATRGDGELG VEELR |