PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020678904.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 22952.7 Da PI: 8.3428 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 116 | 165 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeI+dp+ r r +lg+f taeeAa+a+++a+ +++g XP_020678904.1 116 QYRGVRQRP-WGKWAAEIHDPR----RaVRKWLGTFETAEEAARAYDNAAIEFRG 165 6********.**********82....48************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MAFNQQLNFD NSQLHFPASL SPMESTPLPS INSRRLSHDQ ENTIIVAALV HVLSGEPQET 60 APAIYFPLAA DLPRCQVCGI GSDGCLGCHF FESSPADNAE GSGIRRRIRR RKKKNQYRGV 120 RQRPWGKWAA EIHDPRRAVR KWLGTFETAE EAARAYDNAA IEFRGARAKL NFPFPDQIST 180 GPQSSAAAEA ADSSLATAVS RGSGEEMGGL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 106 | 114 | RRIRRRKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 7e-35 | ERF family protein |