PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020678830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 147aa MW: 16174.9 Da PI: 4.7698 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.8 | 3.1e-14 | 15 | 63 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGVr +k +g+Wv+eIr+p g r r +lg++ ++e Aa a++ a l+g XP_020678830.1 15 YKGVRCRK-QGKWVSEIRVP---GSRDRLWLGTYRSPEAAAVAHDTAFFLLRG 63 9****887.9*********8...435*******************99777766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MSSSNGNILG DDRNYKGVRC RKQGKWVSEI RVPGSRDRLW LGTYRSPEAA AVAHDTAFFL 60 LRGPSSKGLN FPDRAANMQW VSLSPRSVQR VASESGMDFD AKLIGQSSQI FEREESSNGD 120 GFGPSGDGSL NYDGYEDISV DDMEILM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22810.1 | 1e-31 | ERF family protein |