PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020678820.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 263aa    MW: 29547.5 Da    PI: 8.8169
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020678820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.94.9e-3367123259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     ++v+Y+eClkNhAas+Gg+a+DGCgEfmps geegt +alkC+AC+CHRnFHR+e + 
  XP_020678820.1  67 MSVKYRECLKNHAASIGGNATDGCGEFMPS-GEEGTLEALKCSACNCHRNFHRKEIDG 123
                     5799*************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDLSVHEGEI PIPISSNYVG GSGSHIQSQS HNSLPFHHHH PSNVPSLPLQ TPTPLSSSSP  60
FNSKKTMSVK YRECLKNHAA SIGGNATDGC GEFMPSGEEG TLEALKCSAC NCHRNFHRKE  120
IDGDQSPSCA QCFNFKEGRK FISHRNAFGY NPTGNNLILS KHSPHNQMII PFSSMQTSES  180
DEMEGRFPPP MVIKKRFRTK FTTEQKDKML CFAEKVGWKL QKQEESVVQE LCNEIGVKRR  240
VLKVWMHNNK HNLAKKTSNL QLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.12e-66ZF-HD family protein