PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020678223.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 770aa MW: 84493.3 Da PI: 6.5309

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020678223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3e-09	583	620	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+k+gL+ +qV++WF N R + XP_020678223.1 583 FEHflHPYPSDADKHLLARKTGLSRNQVSNWFINARVR 620 554459******************************88 PP
2	BELL	121.4	3.9e-39	444	514	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e+q+kk+kLls+l+eV+krY++y+eq+q+v++sF+ v+g g+a pYt+lA ka+SrhFrcLkdai+ q+ XP_020678223.1 444 RFENQRKKSKLLSMLDEVEKRYNHYCEQMQMVVNSFDSVMGFGAAMPYTALARKAMSRHFRCLKDAITVQL 514 779****************************************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MLQGNIFSFS SSDDNDDDDE LERAQQNRHQ NRRSEKLRVQ SGLEVAVAAS HSHTLVPIEE 60 EVEDEEEEEE EEGGIYGAPL ATRGTNMLSE MFNYGGPADV LATAAAAHAH DTSTNPPAGY 120 HRMIQQIRPD FYGSNNRPQG LAFMSNTSAT ANIINTNNWI SSSSVLIDQD HVAALAAAKQ 180 HGLNSAATDS SSPSSSTAMR LFFMNPPPSA AAMQHHQRPS NSPNRHDDPH QSPMGPATLL 240 HHHHHHDQSQ VFLGGSDGAS IFGEGVSFGG GMRESQVGPS LSLSSSLQQL EMRKAEELRG 300 VRSQSGSAAA SLLFYNSQQQ QEQQLHTTSI HQPPQPPSTC LQSHASHQSQ GQYQQLHMSS 360 SSTYGSISTA NVLRNSKYAR AAQELLEEFC SVSRGHVRGN TTGMRSSSIN PNLLSHGGRG 420 VSSSTAAASS SSSKDIPALS PADRFENQRK KSKLLSMLDE VEKRYNHYCE QMQMVVNSFD 480 SVMGFGAAMP YTALARKAMS RHFRCLKDAI TVQLKQACEL LGDNDGGSGS GLTKGETPKL 540 RLIDQNLRQQ RAFHQMGMME QEAWRPQRGL PDRSVSILRS WLFEHFLHPY PSDADKHLLA 600 RKTGLSRNQV SNWFINARVR LWKPMVEDMY QQEAQEEDSQ INEEDQETNA PHRILLAAAP 660 TTQQQQKQPS HSPESDAPPE THVSITSRPQ LEHYGRLRHD APQTHDQPAA PPPHDLIASN 720 SLIFPPPPLD DEMYRRAAAT AAARTGDLSL TLGLRHAGGN APDAVGRFGL

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MLQGNIFSFS SSDDNDDDDE LERAQQNRHQ NRRSEKLRVQ SGLEVAVAAS HSHTLVPIEE  60
EVEDEEEEEE EEGGIYGAPL ATRGTNMLSE MFNYGGPADV LATAAAAHAH DTSTNPPAGY  120
HRMIQQIRPD FYGSNNRPQG LAFMSNTSAT ANIINTNNWI SSSSVLIDQD HVAALAAAKQ  180
HGLNSAATDS SSPSSSTAMR LFFMNPPPSA AAMQHHQRPS NSPNRHDDPH QSPMGPATLL  240
HHHHHHDQSQ VFLGGSDGAS IFGEGVSFGG GMRESQVGPS LSLSSSLQQL EMRKAEELRG  300
VRSQSGSAAA SLLFYNSQQQ QEQQLHTTSI HQPPQPPSTC LQSHASHQSQ GQYQQLHMSS  360
SSTYGSISTA NVLRNSKYAR AAQELLEEFC SVSRGHVRGN TTGMRSSSIN PNLLSHGGRG  420
VSSSTAAASS SSSKDIPALS PADRFENQRK KSKLLSMLDE VEKRYNHYCE QMQMVVNSFD  480
SVMGFGAAMP YTALARKAMS RHFRCLKDAI TVQLKQACEL LGDNDGGSGS GLTKGETPKL  540
RLIDQNLRQQ RAFHQMGMME QEAWRPQRGL PDRSVSILRS WLFEHFLHPY PSDADKHLLA  600
RKTGLSRNQV SNWFINARVR LWKPMVEDMY QQEAQEEDSQ INEEDQETNA PHRILLAAAP  660
TTQQQQKQPS HSPESDAPPE THVSITSRPQ LEHYGRLRHD APQTHDQPAA PPPHDLIASN  720
SLIFPPPPLD DEMYRRAAAT AAARTGDLSL TLGLRHAGGN APDAVGRFGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-121	TALE family protein