PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020678177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ZF-HD | ||||||||
Protein Properties | Length: 218aa MW: 24538.6 Da PI: 8.6216 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 94.1 | 1.2e-29 | 52 | 102 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +v Y+eCl+NhAaslG+h++DGCgEfmp +++lkCaACgCHR+FHRre++ XP_020678177.1 52 SVSYRECLRNHAASLGSHVLDGCGEFMPG-----ATDSLKCAACGCHRSFHRRESQ 102 689*************************6.....578****************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MDFRRPNHDD HGNQEMSSDR PPIHESTFSK PALPSPSSLL SAGDAGDPSP ASVSYRECLR 60 NHAASLGSHV LDGCGEFMPG ATDSLKCAAC GCHRSFHRRE SQSYHLFDRR PPNNSCGRIP 120 LLLSPPALQK QIQSLGGMES SSEELGLATP PPKKRFRTKF TEEQKEKMME LAERIGWKIQ 180 RQDDANLERF FAEIGISRQV FKVWMHNNNK NSVRKQHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 6e-49 | ZF-HD family protein |