PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020678087.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 275aa    MW: 29678.8 Da    PI: 6.9505
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020678087.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.9e-183584255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWv+eI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  XP_020678087.1 35 KFVGVRQRP-SGRWVSEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 84
                    799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MELQLQKQQS LLSPIQSTKF KSKSKAAAAA AGGNKFVGVR QRPSGRWVSE IKDTTQKIRM  60
WLGTFETAEE AARAYDEAAC LLRGTNTRTN FSTRRPNSAA SSAVDSPLAT RIRKLLHHKK  120
LAGAAVGSGS SGGSPTSSAS TTTDSGGRKQ TSSPATRENY QEVYRPYFAA DFNLASSVPE  180
SSSSSSWAFE AMFDEFELSK SIDFDAAGCG GSEAAAAEVS EFERMKVERQ ISASLYAMNG  240
VQEYFEAVQD LSSSSSLASA HVDPDWDLPA LYHFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-26ERF family protein