PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020677881.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 24602.7 Da PI: 9.604 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.6 | 1e-20 | 23 | 72 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa+++++g XP_020677881.1 23 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 72 69*******.**********8...557************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MAPREKGTGS GRIAGGDVAK AVHFRGVRKR PWGRYAAEIR DPGKKSRVWL GTFDTAEEAA 60 RAYDAAAREF RGSKAKTNFP CAEPYLSPSS QSSTVESSSR DAASTLPPLA TPLPHLDLDQ 120 INRGGLRFPF QRFPANATAL APPFLFFDPF VRSNMMGNLA ATVAVAGGQH HGLLTLESPM 180 MARNFHAPAH SGVQSDSDSS SVVDAQPLSS PPARIGLGIE IDLNLPPPAE T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-24 | ERF family protein |