PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677482.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 350aa    MW: 39650.9 Da    PI: 6.7884
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.21.4e-32139195258
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                     dDgy+WrKYGqK +k+s++prsYYrCt ++C++kk+vers+edp++v++tYeg H h
  XP_020677482.1 139 DDGYKWRKYGQKLIKNSPNPRSYYRCTNPRCNAKKQVERSTEDPETVIVTYEGLHLH 195
                     8******************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MALKAGSLLV PYAQSISLLI KLIRMEDMLD ESVAKWLESL EEEFNMQDVL FHTEQVPLMA  60
PQRRATEPKS EVRSAELVNL LISKVYSGPT IGDIESALSL SCSDDSGRNY RSALQEKGSS  120
TKMDKYTLRL KTCDNGVADD GYKWRKYGQK LIKNSPNPRS YYRCTNPRCN AKKQVERSTE  180
DPETVIVTYE GLHLHFTYSH ILLSQKNDQH AASLNALKKQ KKQTELQPKE SEGQQHMQQI  240
AQSIQNREQP QGNKHLRDGE SYQEFCLEDI LLENPSMREK NIHGLLTDVQ RPQGMLEDVV  300
PLMVRKPCSS ATPSNEPSYF PQESSPLHYS SLFISPSSSQ IDKGILSSIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.12e-42WRKY family protein