PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020677472.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB | ||||||||
Protein Properties | Length: 324aa MW: 36494.2 Da PI: 7.5004 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.7 | 2e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d++++ G++ +W+ +r g++R++k+c++rw +yl XP_020677472.1 14 KGPWTPEEDQKLIDYIQKQGSHgSWRHLPRIAGLNRCGKSCRLRWTNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.6 | 5.8e-18 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++l+++++ +lG++ W++I+ +++ gRt++++k++w+++l XP_020677472.1 68 RGKFSEEEEKLIINLHSMLGNK-WSLISTKLP-GRTDNEIKNYWNTHL 113 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MVRSPCREET GLKKGPWTPE EDQKLIDYIQ KQGSHGSWRH LPRIAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSEEEEKLII NLHSMLGNKW SLISTKLPGR TDNEIKNYWN THLKKKLLLM 120 GIDPVTHRRR TDLELLANFP KLLSSSSNSC SLINPLMENT LGLPTDTVQL ARIQIMQALL 180 QVLLKASSFS SSSSNPNAYS NLVLNNLLSS SLPPLQTFSD SSNSSSLPPG TSAFGESVQT 240 PPSYQDFAAQ NSENISKQLL FYSNSNNMLE PSENISVDQK QDQIDLNETS ATKSISTRSL 300 DALNLSDLDD SDLSWKDFLD QIYW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 5e-81 | MYB family protein |