PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020677388.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 285aa    MW: 31434.6 Da    PI: 5.2459
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020677388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.7e-16113157149
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaa 49 
                     +++kGVr+++ +g+W+AeIrdp    +r  r +lg++++aeeAa+a+ +a
  XP_020677388.1 113 PRFKGVRQRR-WGKWAAEIRDP----IRgVRKWLGTYDSAEEAAEAYQEA 157
                     689****998.**********7....246******************887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MSGPQRQLLI QDMMRAKIKK KATAVRKFES KPMRRIRVLL NDPDATDSSG DEDDLFPVLN  60
LKKRVVREIA LLPFRLNPIS SSSSSTFTID GPENPKKLKT LKLRRIAPTT SSPRFKGVRQ  120
RRWGKWAAEI RDPIRGVRKW LGTYDSAEEA AEAYQEAFTR IQAEKLGLQL SSTPPPSSST  180
SSSISERTLS LASPSSVLDV SAQQIPAPSK PSELPLAPQV EAFDDMDPVD INFTFSGCPS  240
ADFLVGNLDD SGDFLVGNLG DDFVGLDDLP LWDPHFDGGD LSFLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-20ERF family protein