PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020677375.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 147aa MW: 16773.1 Da PI: 9.5594 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.3 | 1.2e-31 | 67 | 125 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vk+ fprsYYrC++ +C+vkk+v+r ++d +v++tYeg Hnh+ XP_020677375.1 67 LDDGFRWRKYGQKKVKNCSFPRSYYRCSQLTCNVKKQVQRLSSDAAIVVTTYEGVHNHP 125 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MEPQQNFPPI LSQQGPPFPI LPEASGLHFC SSSSILGGDE QNKGKGRGKK ESRPRFVFQT 60 RSESDILDDG FRWRKYGQKK VKNCSFPRSY YRCSQLTCNV KKQVQRLSSD AAIVVTTYEG 120 VHNHPCEKLM ETLSPLLNQM QFLSQFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46130.1 | 1e-53 | WRKY family protein |