PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020677126.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 338aa MW: 36977.5 Da PI: 8.553 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 171.5 | 2.5e-53 | 16 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+ + +l++ ++i+e+d+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++ls XP_020677126.1 16 LPPGFRFHPTDEELVVHYLKKKAISAPLPV-TIIAEIDLYKFDPWELPEKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSC 109 79****************************.89***************99999****************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl XP_020677126.1 110 gGTQKVGVKKALVFYGGKPPKGVKTNWIMHEYRL 143 67788***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 338 aa Download sequence |
MESTDSSSAS HQQPQLPPGF RFHPTDEELV VHYLKKKAIS APLPVTIIAE IDLYKFDPWE 60 LPEKANFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPILSCG GTQKVGVKKA 120 LVFYGGKPPK GVKTNWIMHE YRLAESSAAS ARLPVATGDY SSAAKKASLR LDDWVLCRIY 180 KKSNSHQRSA EREKLENGCI HGLLGPPAHD RTPQLQLHQP RTNSSTANYT ALLDSADETF 240 FDGLLASEDC QIPACCRANS AISPATKHLT FSTMENITPS AKRFQSSSSS GSGGGGGNGS 300 AASILNLLNL QIPQQLEEAG VVSLFRQPYS LSEINWSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61110.1 | 1e-101 | NAC family protein |