PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020676960.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Protein Properties

Length: 279aa MW: 31421.8 Da PI: 8.6438

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020676960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	101.3	5.4e-32	88	190	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k ltpsdv+k++rlv+pk++ae++ g e++ l++ede+g+ W+++++y+ +s++yvltkGW++Fvk+++L++gD+v+F + + ++ XP_020676960.1 88 FEKPLTPSDVGKLNRLVIPKQYAEKYfpldaeAG--EKGLLLSFEDENGKIWRFRYSYWTSSQSYVLTKGWSRFVKEKQLDAGDVVIFLRRRGNG 180 99***********************9996533..46779**********************************************876688 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +l+v+ +r+ XP_020676960.1 181 DRLFVGSRRR 190 8899998886 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MKKILLLHLN CYKCRAAISG SCSTQLLELC TETLVFLLLP PPTSTMPANH FVYPTQQAWI 60 WDTTMETYHR HQSQQLGEGM NCEKEPMFEK PLTPSDVGKL NRLVIPKQYA EKYFPLDAEA 120 GEKGLLLSFE DENGKIWRFR YSYWTSSQSY VLTKGWSRFV KEKQLDAGDV VIFLRRRGNG 180 DRLFVGSRRR GTGQDSITAG SAPQPPAMHW NPAFCQSASL PSSSYLYLNS IPQEEQSSEA 240 TEASTGNSKK LRLFGVNLEC GHLITGSQVM SRKASGHQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	5e-61	B3 family protein