PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020676893.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 529aa MW: 58132.7 Da PI: 7.3914 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.3 | 2.9e-32 | 210 | 267 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkver+ +++++ei+Y+g+H h+k XP_020676893.1 210 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERNF-EGQITEIVYKGTHSHPK 267 8****************************************.***************85 PP | |||||||
2 | WRKY | 104.6 | 5.2e-33 | 383 | 441 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d + v++tYeg+Hnh+ XP_020676893.1 383 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTMGCPVRKHVERASHDLRSVITTYEGKHNHD 441 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence |
MASSSGSVEA SSASFSFASP YEASFSDLLA GEGSANDRLT GLTVRGFGDR GGGGGGIPKF 60 KSIPPPSLPI SPPPISPSSY FAIPAGLSPA ELLDSPVLLS SNNILFSPTT GTFPSKTFNW 120 RGINSGSNDN EGREEENRAY YDFSFQNQNK RSSFQQQRDA FKGSQQPWNH QESNIKTEIP 180 AANSSEMQTL QLNTQVNSNN NVTREQRKSD DGYNWRKYGQ KQVKGSENPR SYYKCTFPNC 240 PTKKKVERNF EGQITEIVYK GTHSHPKPQS TRRNSSSSQQ PVHPLAIVAV GSDAAEHSHG 300 GRLGASNLDS VATPDDSSVS FGEEDVDLSS HKSNLAGDEL DEEEPDAKRL RREAENDGAS 360 AAGNKTVREP RVVVQTTSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT TMGCPVRKHV 420 ERASHDLRSV ITTYEGKHNH DVPAARGSRP PEDNSHGTTT AIRPSAISAA PRNSLFGQRL 480 DANFQSYNGP FTLDMLSTQR NYGSNYMNQQ QLKTKEEPKD DMFLESLLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 1e-112 | WRKY family protein |