PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020676729.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 549aa    MW: 58744.2 Da    PI: 7.7061
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020676729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.51.3e-33252310160
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     +dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers  d++v+ei+Y+g+Hnh+k
  XP_020676729.1 252 VDDGYNWRKYGQKQVKGSEFPRSYYKCTHPKCPVKKKVERSL-DGHVTEIIYKGQHNHQK 310
                     59****************************************.***************85 PP

2WRKY106.21.7e-33430488159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++dpk+v++tYeg+Hnh+
  XP_020676729.1 430 LDDGYRWRKYGQKVVKGNPHPRSYYKCTNAGCNVRKHVERASTDPKAVITTYEGKHNHD 488
                     59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    
MAEGGGGGGG LAAPVEEGAK RPSISLPARF TVESLFRGGV SEASPGPMTL VSNFFAEDPE  60
SECRSFSQLL AGAMASPAAI TAPRKFLVEG EDTAAARTSV ETTIADERGR GVGGGGGGER  120
GGASLNLGHS RPMNLLVAQS PYFTVPAGLS PGGLLDSPAM FSNSAHFGMS HQQALAQVTA  180
QAAHSHTQIH SQAEYPSSLS SISLPQQVST TNITTAQPMQ SITSASYKFA SALIPHCDQK  240
AQPVALVVDK PVDDGYNWRK YGQKQVKGSE FPRSYYKCTH PKCPVKKKVE RSLDGHVTEI  300
IYKGQHNHQK PVPNKRSKEG AAELNGNSDP NNADCRPQGD LSNLNKSSEG MTSLCKRARE  360
SGHGASEQLT GSSDGEELGD AEAGIDEAEY SGESEQKKRN LETRVIESAS HRMVTEPRII  420
VQTTSEVDVL DDGYRWRKYG QKVVKGNPHP RSYYKCTNAG CNVRKHVERA STDPKAVITT  480
YEGKHNHDVP AARNSSHSTH ALAGPANRNN SAPHVVESNN QIINGISDLR NNVHRPIAVL  540
QLKGEHEMT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-133WRKY family protein