PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020676646.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 28269.7 Da PI: 8.2238 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.6e-17 | 38 | 87 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d + ++ r +lg+f tae Aa a+++a+ l+g XP_020676646.1 38 KFVGVRQRP-SGRWVAEIKDST---QKIRLWLGTFETAEAAALAYDEAACLLRG 87 799******.7*********32...36**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MDLNQKNQIP HFSPLQSTKL KPKTKLITNS GVGGPANKFV GVRQRPSGRW VAEIKDSTQK 60 IRLWLGTFET AEAAALAYDE AACLLRGSNT RTNFSNRRPS DGSASADSPL SARIRKLLHH 120 KKLPLNGKAS PQHHKNGSFR PSGAIAAASS GSGVSSPASE RKQEIYSPWF AEAAVETMFN 180 GLELSDKGCR WPELDGSGAA EEVGVFERMR EERQTSASLY AMNGVQEYFE AMQDLSVSPS 240 SFDAVLDFPP FLYELDEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 9e-25 | ERF family protein |